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General ProgrammePDF
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Time
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Tuesday 9th June
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Wednesday 10th June
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Thursday 11th June
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Friday 12th June
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09:00-10:00
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I.2 - Microarrays
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I.7 - Phylogeny
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10:00-11:00
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I.3 - Clustering
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Invited
Talk 4
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11:00-11:30
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Coffee Break
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Coffee Break
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Coffee Break
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11:30-12:45
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I.4 - Pattern Recognition
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I.8 - Proteins
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13:00-14:00
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Official opening and Invited Talk 1
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Invited Talk 3
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Invited Talk 5
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14:00-16:00
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Lunch
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Lunch
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Lunch
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16:00-17:00
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Registration
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Invited
Talk 2
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I.5 - Systems Biology
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17:00-18:00
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I.1 - Text Mining
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I.6 – Applications
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18:00-18:30
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18:30-19:00
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[18:30-19-30] Invited talks in IWANN
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19:00-20:30
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Visit to Salamanca
artistic and dinner
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20:30-21:30
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Gala Dinner
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21:30-23:00
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Welcome
Reception
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Time
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Thuesday 9th June
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Wednesday 10th June
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09:00-10:00
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10:00-11:00
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11:00-11:30
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Coffee Break
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11:30-12:45
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13:00-14:00
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Official opening and Invited Talk 1: Prof. Dr. Klaus-Robert Müller (Room Auditorio)
“Using Rest Class and Control Paradigms for Brain Computer Interfacing”
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14:00-16:00
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Lunch
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16:00-17:00
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Registration
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Invited
Talk 2: Prof. Dr. Sigeru Omatu (Room Auditiorio)
“Neuro-Control and Its Applications to Electric Vehicle Control”
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17:00-18:00
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session
I.1 (Room 2.3) – Text Mining [chairman Miguel Rocha]
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Classification of MedLine Documents using MeSH Terms - Daniel Glez-Peña, Sira López, Reyes Pavón, Rosalía Laza, Eva L. Iglesias and Lourdes Borrajo
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GREAT: Gene Regulation EvAluation Tool - Catia Machado, Hugo Bastos, Francisco Couto
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Identifying Gene Ontology Areas for Automated Enrichment - Catia Pesquita, Tiago Grego, Francisco Couto
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Identification of Chemical Entities in Patent Documents - Tiago Grego, Piotr Pęzik, Francisco
M. Couto, Dietrich Rebholz-Schuhmann
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Applying Text Mining to
Search for Protein Patterns - Pablo V. Carrera,
Daniel Glez-Peña, Eva L. Iglesias, Lourdes
Borrajo, Reyes Pavón, Rosalía
Laza, Carmen M. Redondo
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Biomedical Text Mining
Applied To Document Retrieval and Semantic Indexing - Anália
Lourenço, Sónia Carneiro, Eugénio C.
Ferreira, Rafael Carreira, Luis M. Rocha, Daniel Glez-Peña, José R. Mendez, Florentino Fdez-Riverola, Fernando Diaz, Isabel Rocha, Miguel Rocha
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18:00-18:30
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19:00-20:30
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Visit to Salamanca
artistic and dinner
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20:30-21:30
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21:30-23:00
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Welcome
Reception
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Time
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Thursday 11th June
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09:00-10:00
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session I.2 (Room 2.3) - Microarrays
[chairman Sara Madeira]
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CBR System with reinforce in the revision phase for the
classification of CLL leukemia - Juan
F. De Paz, Sara Rodríguez, Javier Bajo and Juan M. Corchado
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An evolutionary approach
for sample-based clustering on microarray data - Daniel Glez-Peña, Fernando Díaz, José R. Méndez,
Juan M. Corchado, Florentino Fdez-Riverola
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EDA-based Logistic Regression Applied to Biomarkers Selection in
Breast Cancer - Santiago González, Victor Robles and
Jose Maria Peña and Oscar Cubo
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Oligonucleotide microarray probe
correction by FixedPoint ICA algorithm - Raul Malutan,
Pedro Gómez, Monica Borda
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10:00-11:00
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session
I.3 (Room 2.3) - Clustering [chairman Rui Camacho]
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Group method of documentary collections using Genetic Algorithms - José L. Castillo, José
R. Fernández, León González
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Partitional Clustering of Protein Sequences - An Inductive
Logic Programming Approach - Nuno A. Fonseca, Vitor
S. Costa, Rui Camacho, Cristina Vieira, Jorge
Vieira
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Segregating Confident Predictions of Chemicals' Properties for
Virtual Screening of Drugs - Axel
J. Soto, Ignacio Ponzoni, Gustavo E. Vazquez
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Efficient Biclustering Algorithms for Time
Series Gene Expression Data Analysis - Sara C. Madeira, Arlindo
L. Oliveira
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11:00-11:30
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Coffee Break
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11:30-12:45
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session
I.4 (Room 2.3) – Pattern Recognition
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Robust association of pathological respiratory events in SAHS - Abraham Otero, Paulo Félix
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Population extinction in genetic algorithms: Application in
evolutionary studies - Antonio Carvajal-Rodríguez, Fernando Carvajal-Rodríguez
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Tabu Search for the Founder Sequence Reconstruction
Problem: A Preliminary Study - Andrea
Roli, Christian Blum
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Visually Guiding and Controlling the search while Mining Chemical
Structures - Max Pereira, Vítor S. Costa, Rui Camacho, Nuno A. Fonseca
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Analysing the evolution of repetitive strands in genomes - José P. Lousado, José Luis Oliveira, Gabriela R. Moura,
Manuel A. S. Santos
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13:00-14:00
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Invited Talk 3: Witold Pedrycz (Room Auditorio):
“Analysis of the Controllers with Respect to Their Robustness and Fault Tolerance”
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14:00-16:00
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Lunch
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16:00-17:00
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session I.5 (Room 2.3) – Systems Biology
[chairman Antonio Carbajal]
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A SIS epidemiological model based on cellular automata on graphs - María J. Fresnadillo, Enrique García-Sánchez,
José E. García-Sánchez, Ángel Martín del Rey,
Gerardo Rodríguez-Sánchez
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A critical review on modelling formalisms
and simulation tools in Computational Biosystems - Daniel Machado,
Rafael S. Costa, Miguel Rocha, Isabel Rocha, Bruce Tidor,
Eugénio C. Ferreira
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A Software Tool for the Simulation and Optimization of Dynamic
Metabolic Models -
Pedro
Evangelista, Isabel Rocha, Eugénio C. Ferreira,
Miguel Rocha
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Large scale dynamic model reconstruction for the central carbon
metabolism of Escherichia coli - Rafael S. Costa, Daniel Machado, Isabel Rocha, Eugénio C. Ferreira
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17:00-18:45
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session
I.6 (Room 2.3) – Applications [chairman David Olivieri]
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Intuitive bioinformatics for genomics applications: Omega-Brigid workflow framework - David Díaz, Sergio
Gálvez, Juan Falgueras, Juan Antonio Caballero, Pilar Hernández, Gonzalo Claros, Gabriel Dorado
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Current Efforts to Integrate Biological Pathway Information - Daniel Glez-Peña, Rubén Domínguez, Gonzalo Gómez-López,
David G. Pisano, Florentino Fdez-Riverola
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BioCASE: Accelerating software
development of genome-wide filtering applications - Rosana Montes, María M.
Abad-Grau
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DynamicFlow: A Client-side Workflow Management System - Pedro
Lopes, Joel Arrais, José L. Oliveira
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Bayesian joint estimation of CN and LOH aberrations - Paola M.V. Rancoita, Marcus Hutter,
Francesco Bertoni, Ivo Kwee
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Development of a workflow for protein sequence analysis based on Taverna Workbench® software - Mariana B. Monteiro,
Manuela E. Pintado, Francisco X. Malcata, Conrad Bessant, and Patrícia R. Moreira
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Automatic Prediction of the Genetic Code
- Mateus Patricio, Jaime Huerta-Cepas, Toni Gabaldón, Rafael Zardoya and
David Posada
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18:45-20:30
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[18:30-19-30] Invited talks in IWANN
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20:30-21:30
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Gala Dinner
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21:30-23:00
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Time
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Friday 12th June
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09:00-10:00
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session
I.7 (Room 2.3) – Phylogeny [chairman Sergio Deusdado]
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Computational challenges on Grid Computing for workflows applied to
Phylogeny - Raúl Isea, Esther Montes,
Antonio J. Rubio-Montero, Rafael Mayo
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ZARAMIT: a system for the evolutionary study of human mitochondrial
DNA
- Roberto Blanco, Elvira Mayordomo
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A First Insight into the In Silico
Evaluation of the Accuracy of AFLP Markers for Phylogenetic
Reconstruction -
María
J. García-Pereira, Humberto Quesada, Armando
Caballero
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A method to compare MALDI-TOF MS PMF spectra and its application in Phyloproteomics - Ignacio Ortea, Lorena Barros, Benito Cañas, Pilar Calo-Mata, Jorge Barros-Velázquez, José M. Gallardo
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10:00-11:00
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Invited
Talk 4: Prof. Dr. Dario Floreano (Room Auditorio): “Methods for Artificial Evolution of Truly Cooperative Robots”
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11:00-11:30
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Coffee Break
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11:30-12:45
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session
I.8 (Room 2.3) – Proteins [chairman Florentino Fdez-Riverola]
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A screening method for Z-value assessment based on the normalized
edit distance - Guillermo Peris and Andrés Marzal
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On the bond graphs in the Delaunay-tetrahedra
of the simplicial decomposition of spatial
protein structures - Rafael Ördög, Vince Grolmusz
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A New Model of Synthetic Genetic Oscillator Based on Trans-Acting
Repressor Ribozyme - Jesús M. Miró Bueno,
Alfonso Rodríguez-Patón
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Efficient exact pattern-matching in proteomic sequences - Sérgio
Deusdado, Paulo Carvalho
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Iterative Lattice Protein Design using Template Matching - David Olivieri
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13:00-14:00
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Invited Talk 5: Ing. Esteban Pérez Castrejón (Room Auditorio): “Ambient Assisted Living and the Mainstream of Digital Home
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14:00-16:00
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Lunch
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Important Note: The invited talks and the sessions of IWANN, IWAAL, DCAI, IWPACBB and SOCO will be opened for all attendants independently of the conference in which they are registered.
Programme IWPACBB: PDF
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